Curriculum Vitae
Konstantinos Koukoutselos

Konstantinos Koukoutselos
B.Sc. Biologist
M.Sc. Neuroscience
PhD Candidate
EDUCATION
04/2017 – Present
University of Bern, Bern, Switzerland
2014 – 2016
University of Maastricht, Maastricht, The Netherlands
2009 – 2014
Aristotle University, Thessaloniki, Greece
TECHNICAL SKILLS
Acquired during PhD:
- Experienced in in vivo single-unit electrophysiology using independently moveable tetrode microdrives from start to finish and silicon probes, including building implants, performing electrophysiological recordings with behaviour, preprocessing data (spike detection and sorting), data exploration and statistical analysis
- Proficient at scripting in MATLAB, and experience with R and Python
- 2 years experience using circuit manipulation tools such as optogenetics
- Expertise in rodent behavioural testing in a variety of paradigms including fear conditioning, elevated plus maze and open field
- 5 years of experience in performing mouse stereotaxic surgeries including procedures such as implantation of chronic electrode implants and optic fibers and viral infusion
- Experience in in vivo monitoring of physiological parameters (ECG, respiration rate) with implantation of chronic electrodes and thermistor
Acquired during MSc:
- Experienced in molecular and biochemical techniques: SDS-PAGE electrophoresis, PCR, qPCR, DNA extraction
- Histological processing and visualization including immunohistochemical staining, confocal microscopy, ImageJ
Acquired during BSc:
- Experienced in DNA and protein extraction, protein purification using affinity chromatography, Western Blot analysis, LC-MS/MS Mass-spectrography analysis
- Expertise in Droshophila melanogaster behavioural testing using T-maze aversive olfactory long term memory behavioural assays with shock avoidance
RESEARCH EXPERIENCE
PhD Thesis
2017 – Present
Supervisor: Dr. Stéphane Chiocchi
Committee: Dr. Antoine Adamantidis, Dr. Benjamin Grewe, Dr. Andrew Macaskill
Group: Systems Neuroscience
Institute: Department of Physiology, University of Bern
Project: Anticipatory coding of anxiety in the ventral hippocampus
Investigation of the role of ventral hippocampus (vHip) in the anticipation of the anxiogenic experience. To address this question, I developed a novel trial-based anxiety paradigm, the forced emotional-shifting task (FEST), with sequential and separated exposure to an anxiogenic situation (an elevated, bright and open space) or a safe situation (closed and darker space). By performing in vivo single-unit recordings from the vHip of freely-moving mice during FEST, we identified both anxiety neurons as well as a distinct neuronal population with ramping activity in the safe configuration of FEST, suggestive of an anticipatory coding for anxiety.
Master’s Thesis
10/2015 – 07/2016
Supervisor: Dr. Bart Rutten, Dr. Joris Vangeneugden
Group: MHεNs School for Mental Health and Neuroscience & Stork Lab
Institute: Psychiatry and Neuropsychology – Maastricht, The Netherlands & Department of Genetics & Molecular biology – Magdeburg, Germany
Project: Understanding susceptibility to traumatic stress: Molecular analysis of an animal PTSD model
The project was part of a research consortium with an aim of completing an in-depth understanding of the underlying mechanisms of genetic susceptibility to PTSD across different species. In the first part, I assisted in the development and efficiency characterisation of specific primers. In the second part, I had to perform an ex vivo investigation of the effect of stress (depending on the time point of occurrence) on the excitation and inhibition patterns within the different ventral hippocampus sub-layers, using immunohistochemical techniques.
Undergraduate Thesis
09/2013 – 09/2014
Supervisor: Dr.Ethimios M.C Skoulakis, Dr. George Mosialos
Group: Laboratory of Molecular Neurobiology and Behaviour
Institute: Biomedical Research center Alexander Fleming, Athens, Greece
Project: Genes interacting with Neuralized protein regulate Long-term Memory in D. melanogaster
Investigation of the formation of long-term memory (LTM) in wild type/and mutants of Drosophila melanogaster, using a negatively reinforced operant olfactory conditioning paradigm. During this period, I developed my own behavioural set-up and completed a series of experiments to characterize the gain of function in LTM by overexpressing the Neuralized protein.
Volunteer Practical
09/2016 – 02/2017
Supervisor: Dr.Pieter Roelfsema, Dr. Ulf H Schnabel, Dr. Sreedeep Mukherjee
Group: Vision and Cognition
Institute: Netherlands Institute of Neuroscience, Amsterdam, The Netherlands
Project: Figure ground segregation in behaving mice
During this period, I got hands-on experience in working with head-fixed mice during a visual discrimination task while performing in vivo multiunit recordings or 2-photon imaging. I managed to get practical experience in working with behaving animals as long as basic principles of neuronal interogation while improving my analytical skills (-see acknowledgments in L. Kirchberger, S. Mukherjee, U. H. Schnabel, E. H. van Beest, A. Barsegyan, C. N. Levelt, J. A. Heimel, J. A. M. Lorteije, C. van der Togt, M. W. Self, P. R. Roelfsema, The essential role of recurrent processing for figure-ground perception in mice. Sci. Adv. 7, eabe1833 (2021).)
SELECTED GRADUATE SCHOOLS
- FENS-Hertie Winter School: Neural Control of Instinctive and Innate behaviour, 7-11 January 2019, Obergurgl, Austria.
- Neuromatch 2.0 (13-31 July 2020; https://neuromatch.io/).
CONFERENCE POSTERS AND TALKS
- Koukoutselos,K. and Ciocchi,S. (2019). Neural correlates for anxiety and its prediction in the ventral CA1 hippocampus. FENS-Hertie Winter School: Neural Control of Instinctive and Innate behaviour, 7-11 January 2019, Obergurgl, Austria.
- Koukoutselos,K. and Ciocchi,S. (2020). Neural correlates for anxiety and its prediction in the ventral CA1 hippocampus. Swiss Society for Neuroscience meeting, 22 February 2020, Bern, Switzerland.
- Schnabel,U H.,Mukherjee,S.,Koukoutselos,K., Roelfsema,P R. (2016). Figure ground segregation. Shortlisted talk – Foundation Fellowship for academic scientific research, 16 September,Leverkusen, Germany.
HONOURS AND A WARDS
2015-2016
Leventis Fountation, MSc fellowship
2009
State Stipend, among the 5 highest ranked students admited in the School of Biology, Aristotle Universtity, Thessaloniki, Greece
2003-2008
Award of the ministry of education for excellence
2003-2008
Veakios Foundation, fellowship of excellence
LANGUAGE SKILLS
Greek
Native Speaker
English
Fluent Speaker
German
Independent language use